Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015905570.1_cds_XP_016455828.1_49720
CDS Infomation

[gene=LOC107779841] [db_xref=GeneID:107779841] [protein=serine hydroxymethyltransferase 3, chloroplastic-like] [protein_id=XP_016455828.1] [location=complement(join(19259..19533,19612..19684,20095..20202,20282..20368,20722..20826,22328..22450,22572..22684,22777..22894,22977..23151,23342..23537,24557..24773))] [gbkey=CDS]
Sequence

ATGGAGGCTTGCTGTGGAGCTGCAGTGATGGGTTCTTCTATTCAGCAACCTGTTTGGGTT
AAAGGATCAGCTTTTCCTTTAAAAGGTGAAATGATAAAATTAAATGGGGTGGTTAAATTA
TGCTCTTCTAAGCCTTGCAGAGCTTCTCAACTTGAAGGGAGCTTGGTTACTGGAAGGCCT
CCTTCTTCTGTTTCTGTTCCTATCCCAGAAATGGCAGGTGCTGGGAGCAGCTTTATAGAC
TATGAATTGGGTGAAGCTGATCCTGAAGTTCGTGGTATTATTGACAAAGAGAAGGAACGT
CAATTTCGGAGCTTAGAGCTTATTGCCTCTGAGAATTTCACATCTCGAGCAGTGATGGAG
GCAGTGGGTTCTTGCCTTACAAACAAATACTCTGAAGGACTACCAGGCAAAAGATATTAT
GGTGGAAACGAGTACATTGATGAGTTAGAAATACTCTGCCAAGAGAGGGCTTTGGCAGCC
TTTAACTTAGATGGAAAACAGTGGGGCGTCAATGTTCAACCACTATCTGGCTCTCCAGCA
AATTTCGAAGTTTATACAGCAATTCTTAATCCACATGACCGGATCATGGGATTGGACTTA
CCTCATGGAGGTCATTTGTCCCATGGATTTATGACTCCTAAAAGACGAGTTTCAGGCACA
TCTATTTACTTTGAATCCATGCCTTATCGGCTTGATGAATCTTCAGGCCTTGTTGATTAT
GACATGCTTGAGAAAACAGCAACCCTTTTTCGGCCAAAACTTATTATTGCCGGTGCTAGT
GCATATCCCCGAGATTTTGATTATCCTCGTATGAGAACGATAGCAGATGCTGTTGGAGCC
TTTCTCATGATGGATATGGCGCACATTAGTGGGCTTGTTGCCGCCTCTGTAGTTGCTAAT
CCATTTGAATACTGTGACATTGTTACAACAACAACTCACAAGTCTCTGAGAGGTCCTAGA
GGAGGAATGATCTTCTTCAAGAAAGATCCCATTCTAGGTGTTTATTTGGAAACTGCCATC
AACAATGCTGTTTTTCCAGGGTTGCAGGGTGGCCCACATAATCACACAATTGGAGGATTA
GCTGTTTGCTTGAAGCATGCCAAATCACCTGATTTCAAGGCTTATCAGAACAAGGTGGTC
TCTAACTCTAGAGCTCTTGCAAGCCGGTTAACGGAGTTGGGGTACAAGCTGGTTTCTGGA
GGAACTGACAATCATTTGGTTCTAGTGGATCTCAGGCCCTTAGGTGCTGATGGTGCTAGA
GTGGAGAAAATACTTGACATGGCATCAATCACGCTCAATAAGAATTCAGTACCCGGTGAT
AAAAGTGCACTAGTGCCTGGTGGTATACGCATAGGTTCACCTGCAATGACCACTCGAGGT
TTCTCTGAGAAAGAATTTGTAACAGTTGCAGACTTCATTAATGAGGGTGTGCAGATAACT
CTTGAGGCCAAGAAGTTAGTCTCTGGTTCAAAGCTTCAAGATTTCTTGAAGTTTGTTACT
TCACCGGAGTTCCCTTTGATCGATAAGGTGTTAAATTTGCAAAGAAGAGTTGAAGCTTTG
ACAACCCAATACCCATTGCCCGGCTTGTGA

Peptide Sequence

PEP ID

XP_016455828.1
PEP Infomation

PREDICTED: serine hydroxymethyltransferase 3, chloroplastic-like [Nicotiana tabacum]
Sequence

MEACCGAAVMGSSIQQPVWVKGSAFPLKGEMIKLNGVVKLCSSKPCRASQLEGSLVTGRP
PSSVSVPIPEMAGAGSSFIDYELGEADPEVRGIIDKEKERQFRSLELIASENFTSRAVME
AVGSCLTNKYSEGLPGKRYYGGNEYIDELEILCQERALAAFNLDGKQWGVNVQPLSGSPA
NFEVYTAILNPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESSGLVDY
DMLEKTATLFRPKLIIAGASAYPRDFDYPRMRTIADAVGAFLMMDMAHISGLVAASVVAN
PFEYCDIVTTTTHKSLRGPRGGMIFFKKDPILGVYLETAINNAVFPGLQGGPHNHTIGGL
AVCLKHAKSPDFKAYQNKVVSNSRALASRLTELGYKLVSGGTDNHLVLVDLRPLGADGAR
VEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVTVADFINEGVQIT
LEAKKLVSGSKLQDFLKFVTSPEFPLIDKVLNLQRRVEALTTQYPLPGL

Transcript Sequence

Gene sequence data has not been registered.